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1.
Data Brief ; 41: 107893, 2022 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-35198674

RESUMO

High-resolution computed micro-tomography is an important area of science, which correlates well with several experimental methodologies and serves as a basis for advanced computational physics studies, in which high-resolution images are used as input to different scientific simulation models. The dataset presented herein includes (raw) grayscale images obtained using the Bruker Skyscan 1272 X-Ray tomograph; filtered images acquired through contrast enhancement and noise reduction filters; and segmented images obtained by using the IsoData segmentation method. All images have a resolution of 2.25 µm (isometric voxels) and size of 10003 voxels.

2.
Sci Rep ; 11(1): 11370, 2021 Jun 15.
Artigo em Inglês | MEDLINE | ID: mdl-34131175

RESUMO

Permeability is the key parameter for quantifying fluid flow in porous rocks. Knowledge of the spatial distribution of the connected pore space allows, in principle, to predict the permeability of a rock sample. However, limitations in feature resolution and approximations at microscopic scales have so far precluded systematic upscaling of permeability predictions. Here, we report fluid flow simulations in pore-scale network representations designed to overcome such limitations. We present a novel capillary network representation with an enhanced level of spatial detail at microscale. We find that the network-based flow simulations predict experimental permeabilities measured at lab scale in the same rock sample without the need for calibration or correction. By applying the method to a broader class of representative geological samples, with permeability values covering two orders of magnitude, we obtain scaling relationships that reveal how mesoscale permeability emerges from microscopic capillary diameter and fluid velocity distributions.

3.
Sci Rep ; 10(1): 6023, 2020 04 07.
Artigo em Inglês | MEDLINE | ID: mdl-32265529

RESUMO

Lignin is a heterogeneous aromatic polymer responsible for cell wall stiffness and protection from pathogen attack. However, lignin represents a bottleneck to biomass degradation due to its recalcitrance related to the natural cell wall resistance to release sugars for fermentation or further processing. A biological approach involving genetics and molecular biology was used to disrupt lignin pathway synthesis and decrease lignin deposition. Here, we imaged three-dimensional fragments of the petioles of wild type and C4H lignin mutant Arabidopsis thaliana plants by synchrotron cryo-ptychography. The three-dimensional images revealed the heterogeneity of vessels, parenchyma, and fibre cell wall morphologies, highlighting the relation between disturbed lignin deposition and vessel implosion (cell collapsing and obstruction of water flow). We introduce a new parameter to accurately define cell implosion conditions in plants, and we demonstrate how cryo-ptychographic X-ray computed tomography (cryo-PXCT) provides new insights for plant imaging in three dimensions to understand physiological processes.


Assuntos
Arabidopsis/química , Arabidopsis/ultraestrutura , Lignina/análise , Arabidopsis/genética , Imageamento Tridimensional , Lignina/genética , Mutação , Tomografia Computadorizada por Raios X
4.
J Magn Reson ; 289: 63-71, 2018 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-29471277

RESUMO

The NMR measurements of longitudinal and transverse relaxation times and its multidimensional correlations provide useful information about molecular dynamics. However, these experiments are very time-consuming, and many researchers proposed faster experiments to reduce this issue. This paper presents a new way to simultaneously perform T2-T2 Exchange and T1-T2 correlation experiments by taking the advantage of the storage time and the two steps phase cycling used for running the relaxation exchange experiment. The data corresponding to each step is either summed or subtracted to produce the T2-T2 and T1-T2 data, enhancing the information obtained while maintaining the experiment duration. Comparing the results from this technique with traditional NMR experiments it was possible to validate the method.

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