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1.
J Theor Biol ; 356: 201-12, 2014 Sep 07.
Artigo em Inglês | MEDLINE | ID: mdl-24813072

RESUMO

We introduce a simple procedure of multivariate signal analysis to uncover the functional connectivity among cells composing a living tissue and describe how to apply it for extracting insight on the effect of drugs in the tissue. The procedure is based on the covariance matrix of time resolved activity signals. By determining the time-lag that maximizes covariance, one derives the weight of the corresponding connection between cells. Introducing simple constraints, it is possible to conclude whether pairs of cells are functionally connected and in which direction. After testing the method against synthetic data we apply it to study intercellular propagation of Ca(2+) waves in astrocytes following an external stimulus, with the aim of uncovering the functional cellular connectivity network. Our method proves to be particularly suited for this type of networking signal propagation where signals are pulse-like and have short time-delays, and is shown to be superior to standard methods, namely a multivariate Granger algorithm. Finally, based on the statistical analysis of the connection weight distribution, we propose simple measures for assessing the impact of drugs on the functional connectivity between cells.


Assuntos
Trifosfato de Adenosina/farmacologia , Algoritmos , Astrócitos/metabolismo , Sinalização do Cálcio/efeitos dos fármacos , Cálcio/metabolismo , Modelos Biológicos , Animais , Relação Dose-Resposta a Droga , Humanos , Camundongos
2.
Phys Rev E Stat Nonlin Soft Matter Phys ; 69(6 Pt 2): 066206, 2004 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-15244707

RESUMO

We investigate pattern formation and evolution in coupled map lattices when advection is incorporated, in addition to the usual diffusive term. All patterns may be suitably grouped into five classes: three periodic, supporting static patterns and traveling waves, and two nonperiodic. Relative frequencies are determined as a function of all model parameters: diffusion, advection, local nonlinearity, and lattice size. Advection plays an important role in coupled map lattices, being capable of considerably altering pattern evolution. For instance, advection may induce synchronization, making chaotic patterns evolve periodically. As a byproduct we describe a practical algorithm for classifying generic pattern evolutions and for measuring velocities of traveling waves.

3.
Phys Rev E Stat Nonlin Soft Matter Phys ; 69(2 Pt 2): 026209, 2004 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-14995550

RESUMO

Ordinarily, two different topologies have been used to model spatiotemporal chaos and to study complexity in networks of maps: one where sites interact only with nearest neighbors (e.g., the standard diffusive coupling) and one where sites interact with all sites in the network (global coupling). Here we investigate intermediate regimes considering the interaction range as a free tunable parameter. The synchronization behavior normally seen in globally coupled maps is found to set in for interaction ranges considerably smaller than the system size. In addition, we analytically derive stability conditions for the onset of coherent states (full synchronization) from which the minimum interaction range needed to induce coherence in homogeneously coupled maps can be determined. Such conditions are also obtained for inhomogeneous situations when the coupling strength decreases linearly with the distance. The characteristic range for the onset of coherence is studied in detail as a function of model parameters.

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