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Appl Environ Microbiol ; 79(18): 5601-7, 2013 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-23851084

RESUMO

Our understanding of the sources of Mycobacterium avium infection is partially based on genotypic matching of pathogen isolates from cases and environmental sources. These approaches assume that genotypic identity is rare in isolates from unlinked cases or sources. To test this assumption, a high-resolution PCR-based genotyping approach, large-sequence polymorphism (LSP)-mycobacterial interspersed repetitive unit-variable-number tandem repeat (MIRU-VNTR), was selected and used to analyze clinical and environmental isolates of M. avium from geographically diverse sources. Among 127 clinical isolates from seven locations in North America, South America, and Europe, 42 genotypes were observed. Among 12 of these genotypes, matches were seen in isolates from apparently unlinked patients in two or more geographic locations. Six of the 12 were also observed in environmental isolates. A subset of these isolates was further analyzed by alternative strain genotyping methods, pulsed-field gel electrophoresis and MIRU-VNTR, which confirmed the existence of geographically dispersed strain genotypes. These results suggest that caution should be exercised in interpreting high-resolution genotypic matches as evidence for an acquisition event.


Assuntos
Microbiologia Ambiental , Variação Genética , Tipagem Molecular/métodos , Mycobacterium avium/classificação , Mycobacterium avium/genética , Tuberculose/epidemiologia , Tuberculose/microbiologia , DNA Bacteriano/química , DNA Bacteriano/genética , Europa (Continente) , Genótipo , Humanos , Epidemiologia Molecular , Dados de Sequência Molecular , Mycobacterium avium/isolamento & purificação , América do Norte , Análise de Sequência de DNA , América do Sul
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