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Dominance of neotropical tree communities by a few species is widely documented, but dominant trees show a variety of distributional patterns still poorly understood. Here, we used 503 forest inventory plots (93,719 individuals ≥2.5 cm diameter, 2609 species) to explore the relationships between local abundance, regional frequency and spatial aggregation of dominant species in four main habitat types in western Amazonia. Although the abundance-occupancy relationship is positive for the full dataset, we found that among dominant Amazonian tree species, there is a strong negative relationship between local abundance and regional frequency and/or spatial aggregation across habitat types. Our findings suggest an ecological trade-off whereby dominant species can be locally abundant (local dominants) or regionally widespread (widespread dominants), but rarely both (oligarchs). Given the importance of dominant species as drivers of diversity and ecosystem functioning, unravelling different dominance patterns is a research priority to direct conservation efforts in Amazonian forests.

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Teak (Tectona grandis) is one of the most important wood sources, and it is cultivated in tropical regions with a significant market around the world. Abiotic stresses are an increasingly common and worrying environmental phenomenon because it causes production losses in both agriculture and forestry. Plants adapt to these stress conditions by activation or repression of specific genes, and they synthesize numerous stress proteins to maintain their cellular function. For example, APETALA2/ethylene response factor (AP2/ERF) was found to be involved in stress signal transduction. A search in the teak transcriptome database identified an AP2/ERF gene named TgERF1 with a key AP2/ERF domain. We then verified that the TgERF1 expression is rapidly induced by Polyethylene Glycol (PEG), NaCl, and exogenous phytohormone treatments, suggesting a potential role in drought and salt stress tolerance in teak. The full-length coding sequence of TgERF1 gene was isolated from teak young stems, characterized, cloned, and constitutively overexpressed in tobacco plants. In transgenic tobacco plants, the overexpressed TgERF1 protein was localized exclusively in the cell nucleus, as expected for a transcription factor. Furthermore, functional characterization of TgERF1 provided evidence that TgERF1 is a promising candidate gene to be used as selective marker on plant breeding intending to improve plant stress tolerance.

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NAC transcription factors play critical roles in xylem secondary development and in regulation of stress response in plants. NAC proteins related to secondary cell wall development were recently identified and characterized in Tectona grandis (teak), one of the hardwood trees of highest economic importance in the world. In this work, we characterized the novel TgNAC01 gene, which is involved in signaling pathways that mediate teak response to stress. Abscisic acid (ABA) increases TgNAC01 expression in teak plants. Therefore, this gene may have a role in signaling events that mediate ABA-dependent osmotic stress responsive in this plant species. Stable expression in tobacco plants showed that the TgNAC01 protein is localized in the cell nucleus. Overexpression of TgNAC01 in two out three independent transgenic tobacco lines resulted in increased growth, leaf senescence and salt tolerance compared to wild type (WT) plants. Moreover, the stress tolerance of transgenic plants was affected by levels of TgNAC01 gene expression. Water potential, gas exchange and chlorophyll fluorescence were used to determine salt stress tolerance. The 35S:TgNAC01-6 line under 300 mM NaCl stress responded with a significant increase in photosynthesis rate, stomatal conductance, transpiration and carboxylation efficiency, but lower water potential compared to WT plants. The data indicate that the TgNAC01 transcription factor acts as a transcriptional activator of the ABA-mediated regulation and induces leaf senescence.

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The search for genetic materials resistant to adverse weather conditions has been a major focus in studies on species of economic interest. The objective of the present study was to assess the growth and photosynthesis of rubber seedlings clones under two conditions of atmospheric evaporative demand, characterized by fluctuations in temperature (TEMP) and vapor pressure deficit (VPD), associated to two water regimens. Hevea brasiliensis Muell. Arg (RRIM 600 and FX 3864) clones were assessed in two microclimates, at low (TEMP 21.2 ºC and VPD 0.29 Kpa) and high (TEMP 26.9 ºC and VPD 1.49 Kpa) atmospheric evaporative demand, under two water regimens: water deficit and well-watered. Water deficit 50% water availability was sufficient to reduce the net CO2 assimilation rate, leaf area and total chlorophyll of the clones studied that impacted growth in both microclimates. The effects of water deficit on growth and net carbon assimilation rate were intensified under high atmospheric evaporative demand. However, when comparing the two clones studied, RRIM 600 showed greater growth and photosynthesis without water restriction. The FX 3864 clone, despite the high CO2 assimilation values under high atmospheric demand and without water restriction, showed a reduced growth. The results of this study form an important basis for the selection of genotypes with the potential to develop in adverse climatic conditions. In this sense, the RRIM 600 genotype is recommended as a promising material that would best adapt under adverse climatic conditions.

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Tabebuia rosea (rosy trumpet) is an economically important neotropical tree in Mexico that is highly valued for the quality of its wood, which is used for furniture, crafts, and packing, and for its use as an ornamental and shade tree in parks and gardens. During surveys conducted in the lower Balsas River Basin region in the states of Guerrero and Michoacán, symptoms of floral malformation were detected in T. rosea trees. The main objectives of this study were to describe this new disease, to determine its causal agent, and to identify it using DNA sequence data. A second set of objectives was to analyze the phylogenetic relationship of the causal agent to Fusarium spp. associated with Swietenia macrophylla trees with malformation surveyed in the same region and to compare mycotoxin production and the mating type idiomorphs of fusaria recovered from T. rosea and S. macrophylla. Tabebuia rosea showed malformed inflorescences with multiple tightly curled shoots and shortened internodes. A total of 31 Fusarium isolates recovered from symptomatic T. rosea (n = 20) and S. macrophylla (n = 11) trees were identified by molecular analysis as Fusarium pseudocircinatum. Pathogenicity tests showed that isolates of F. pseudocircinatum recovered from T. rosea induced malformation in inoculated T. rosea seedlings. Eighteen F. pseudocircinatum isolates were tested for their ability to produce mycotoxins and other secondary metabolites. Moniliformin, fusaric acid, bikaverin, beauvericin, aurofusarin. and 8-O-methylbostrycoidin were produced by at least one strain of the 18 isolates tested. A multiplex PCR assay for mating type idiomorph revealed that 22 F. pseudocircinatum isolates were MAT1-1 and that 9 were MAT1-2. Here, we report a new disease of T. rosea in Mexico caused by F. pseudocircinatum.

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The balance between efficiency of absorption and use of light energy is fundamental for plant metabolism and to avoid photoinhibition. Here, we investigated the effects of light environments on the photosynthetic apparatus of tropical tree species of three successional groups (pioneer, mid-, and late successional) subjected to different light conditions: full sunlight (FS), moderate shade (MS), and deep shade (DS). Twenty-nine ecophysiological parameters were correlated with each other. The pioneer species exhibited better photochemical performance and a more efficient antioxidant enzymatic system in comparison with the other successional groups. Plants in FS showed higher intensity of lipid peroxidation, with superoxide dismutase having a prominent role in the antioxidant system. At lower irradiance the enzymatic activity was reduced, and the photochemical efficiency was the preferred way to reduce oxidative damages. P was highly related to photochemical yield, and the N modulation amplified the light harvesting complex in DS to the detriment of the antioxidant system. Despite evidence of cell damage, most species exhibited the ability to adjust to high irradiance. Contrary to expectations, Hymenea courbaril (late-successional) exhibited higher plasticity to fluorescence, nutritional, and antioxidant parameters. Only Carapa guianensis (late-successional) displayed photoinhibitory damage in FS, and Ochroma pyramidale (pioneer) did not survive in DS, suggesting that acclimation to shade is more challenging than to high irradiance.

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Environmental variation along the geographical space can shape populations by natural selection. In the context of global warming and changing precipitation regimes, it is crucial to understand the role of environmental heterogeneity in tropical trees adaptation, given their disproportional contribution to water and carbon biogeochemical cycles. Here, we investigated how heterogeneity in freshwater availability along tropical wetlands has influenced molecular variations of the black mangrove (Avicennia germinans). A total of 57 trees were sampled at seven sites differing markedly in precipitation regime and riverine freshwater inputs. Using 2,297 genome-wide single nucleotide polymorphic markers, we found signatures of natural selection by the association between variations in allele frequencies and environmental variables, including the precipitation of the warmest quarter and the annual precipitation. Additionally, we found candidate loci for selection based on statistical deviations from neutral expectations of interpopulation differentiation. Most candidate loci within transcribed sequences were functionally associated with central aspects of drought tolerance or plant response to drought. Moreover, our results suggest the occurrence of the rapid evolution of a population, probably in response to sudden and persistent limitations in plant access to soil water, following a road construction in 1974. Observations supporting rapid evolution included the reduction in tree size and changes in allele frequencies and in transcript expression associated with increased drought tolerance through the accumulation of osmoprotectants and antioxidants, biosynthesis of cuticles, protection against protein degradation, stomatal closure, photorespiration and photosynthesis. We describe a major role of spatial heterogeneity in freshwater availability in the specialization of this typically tropical tree.

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Abstract Ecosystems degradation, and consequently biodiversity loss, has severe impacts on people around the world. The Intergovernmental Platform on Biodiversity and Ecosystem Services (IPBES) is one of the international initiatives that have emerged to inform policy makers and aid decisions to prevent further global biodiversity loss, focusing on the interdependence between natural systems and human culture. IPBES promotes the use of scenarios and modelling approaches as a fundamental tool to advance the understanding of the relationships between drivers of change, Nature's Contributions to People (NCP), and social systems. Local-scale case studies with a system approach demonstrating how current knowledge can be used to inform decision-making are still scarce. Here, we present a comprehensive conceptual model and a series of four scenarios under different policies for shea tree species management, as a case-study of applying systems thinking and the NCP concept to a local-scale socio-ecological system. We first characterized the central processes, NCP, drivers and pressures affecting the shea tree system, to investigate the impacts of the multiple uses of the shea tree species on the system as a whole. We then described potential policy options, developed four scenarios, and evaluated them by a Bayesian Belief Network (BBN). We predicted qualitative outcomes of the proposed scenarios: Business-as-usual (BAU), "Conservation and fair trade", "Agroforestry and fair trade" and "Industrial development". We found that the scenarios focussing on conservation, fair trade and agroforestry, can improve the conservation status of shea trees, and enhance wellbeing in the local communities. In this case study, we demonstrate that the development of a comprehensive conceptual model at a local scale can be a useful exercise to identify opportunities for effective policy strategies and social innovation. The shea tree case study can provide an example for modelling non-timber forest products in other regions around the world that face similar drivers and pressures. Species for which this model could be adapted include Central and South American species such as the Brazilian nut (Bertholletia excelsa), cocoa (Theobroma cacao), andiroba (Carapa guianensis), açai (Euterpe oleracea) and the wax palm (Ceroxylon quindiuense). The model and workflow applied here may thus be used to understand similar socio-ecological systems with local and international economic value across the Neotropical region.

Resumo A degradação dos ecossistemas e sua consequente perda de biodiversidade apresentam graves impactos sobre as pessoas em todo o mundo. A Plataforma Intergovernamental de Biodiversidade e Serviços Ecossistêmicos (IPBES) é uma das iniciativas internacionais que surgiram para informar tomadores de decisão e o desenvolvimento de políticas para evitar mais perdas globais de biodiversidade, com foco na interdependência entre sistemas naturais e a cultura humana. O IPBES promove o uso de cenários futuros e abordagens de modelagem como uma ferramenta fundamental para avançar no entendimento das relações entre fatores motivadores de mudança (vetores), as Contribuições da Natureza para as Pessoas (NCP) e sistemas sociais. Estudos de caso em escala local com uma abordagem de sistemas mostrando como o conhecimento atual pode ser usado para informar a tomada de decisão ainda são poucos. Neste trabalho, apresentamos um modelo conceitual abrangente e um conjunto de quatro cenários sob diferentes políticas para o manejo da árvore de karité, como estudo de caso para a aplicação de uma abordagem de sistemas e do conceito de NCP em um sistema socioecológico em escala local. Primeiro nós caracterizamos os processos centrais, os NCP, e os vetores e pressões que afetam o sistema da árvore de karité, para então, investigar os impactos dos múltiplos usos da espécie no sistema como um todo. Em seguida, descrevemos opções de políticas possíveis, a partir das quais desenvolvemos quatro cenários e os avaliamos por Redes Bayesianas baseadas em Crenças (BBN). Nós avaliamos os resultados qualitativos dos quatro cenários de manejo propostos: "business-as-usual" (BAU), "Conservação e Fair Trade", "Agrofloresta e Fair Trade", e "Desenvolvimento Agroindustrial". Verificamos que os cenários que incluíam medidas de conservação e comércio justo, assim como o que previa práticas agroflorestais indicaram potenciais melhorias no status de conservação das árvores de karité e aprimoramento do bem-estar das comunidades locais. Neste estudo de caso, demonstramos que o desenvolvimento de um modelo conceitual mais completo na escala local pode ser útil na identificação de oportunidades para a proposição de estratégias políticas efetivas e inovação social. O estudo de caso da árvore de karité pode fornecer um exemplo de modelagem de produtos florestais não-madeireiros para outras regiões do mundo que enfrentam vetores de mudança e pressões semelhantes. As espécies para as quais esse modelo pode ser adaptado incluem espécies da América Central e do Sul, como a castanha-do-brasil (Bertholletia excelsa), cacau (Theobroma cacao), andiroba (Carapa guianensis), açaí (Euterpe oleracea) e a palma da cera (Ceroxylon quindiuense). O modelo e a proposta de trabalho aplicados aqui podem, portanto, ser usados para entender sistemas socio-ecológicos semelhantes com espécies de valor econômico local e internacional em toda a região neotropical.

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NAC proteins are one of the largest families of plant-specific transcription factors (TFs). They regulate diverse complex biological processes, including secondary xylem differentiation and wood formation. Recent genomic and transcriptomic studies of Tectona grandis L.f. (teak), one of the most valuable hardwood trees in the world, have allowed identification and analysis of developmental genes. In the present work, T. grandis NAC genes were identified and analyzed regarding to their evolution and expression profile during wood formation. We analyzed the recently published T. grandis genome, and identified 130 NAC proteins that are coded by 107 gene loci. These proteins were classified into 23 clades of the NAC family, together with Populus, Eucalyptus, and Arabidopsis. Data on transcript expression revealed specific temporal and spatial expression patterns for the majority of teak NAC genes. RT-PCR indicated expression of VND genes (Tg11g04450-VND2 and Tg15g08390-VND4) related to secondary cell wall formation in xylem vessels of 16-year-old juvenile trees. Our findings open a way to further understanding of NAC transcription factor genes in T. grandis wood biosynthesis, while they are potentially useful for future studies aiming to improve biomass and wood quality using biotechnological approaches.

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The conservation of plant genetic resources is essential for breeding programs. Regarding the native species of the Brazilian Cerrado biome, many studies have demonstrated their high potential for use in both medicines and foods. Hymenaea stigonocarpa, a tree with wide occurrence in the Cerrado, has economic importance, and due its extractive use, the establishment of a breeding program is relevant for sustainable use and conservation. Thus, the first germplasm collection of the species was installed at the Federal University of Goiás (UFG). To know the magnitude of genetic variability and how it was distributed in the collection, 353 individuals, distributed in 119 families from 24 subpopulations collected in the Cerrado biome, were genotyped using capillary electrophoresis. Nine pairs of microsatellite markers were genotyped. The UFG germplasm collection showed a high level of genetic diversity (mean [Formula: see text] = 0.554) at the evaluated loci. By Analysis of Molecular Variance (AMOVA), a significant genetic structure was detected (θP = 0.152, p < 0.01), which was expected since the subpopulations that originated the germplasm collection were collected in geographically distant locations. In addition, the germplasm collection had a population effective size of 54.9 and presented an allelic representation of 79.89% compared to 32 natural subpopulations. These results demonstrate that the germplasm collection preserves a high genetic diversity of H. stigonocarpa with a population effective size considered sufficient for the conduction of a breeding program.

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