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Discovery, structural characterization, and functional insights into a novel apiosidase from the GH140 family, isolated from a lignocellulolytic-enriched mangrove microbial community.
Liberato, Marcelo Vizona; Paixao, Douglas Antonio Alvaredo; Tomazetto, Geizecler; Ndeh, Didier; Bolam, David N; Squina, Fabio Marcio.
Afiliação
  • Liberato MV; Programa de Processos Tecnológicos e Ambientais, Universidade de Sorocaba, Sorocaba, Brazil.
  • Paixao DAA; Biosciences Institute, Newcastle University, Newcastle Upon Tyne, England.
  • Tomazetto G; Brazilian Biorenewables National Laboratory (LNBR), Brazilian Center for Research in Energy and Materials (CNPEM), Campinas, Brazil.
  • Ndeh D; Department of Pediatrics, University of Pittsburgh School of Medicine, UPMC Children's Hospital of Pittsburgh, Pittsburgh, United States.
  • Bolam DN; Division of Plant Sciences, School of Life Sciences, University of Dundee, Dundee, Scotland.
  • Squina FM; Biosciences Institute, Newcastle University, Newcastle Upon Tyne, England.
Biotechnol Lett ; 46(2): 201-211, 2024 Apr.
Article em En | MEDLINE | ID: mdl-38280177
ABSTRACT

OBJECTIVES:

Apiosidases are enzymes that cleave the glycosidic bond between the monosaccharides linked to apiose, a branched chain furanose found in the cell walls of vascular plants and aquatic monocots. There is biotechnological interest in this enzyme group because apiose is the flavor-active compound of grapes, fruit juice, and wine, and the monosaccharide is found to be a plant secondary metabolite with pharmaceutical properties. However, functional and structural studies of this enzyme family are scarce. Recently, a glycoside hydrolase family member GH140 was isolated from Bacteroides thetaiotaomicron and identified as an endo-apiosidase.

RESULTS:

The structural characterization and functional identification of a second GH140 family enzyme, termed MmApi, discovered through mangrove soil metagenomic approach, are described. Among the various substrates tested, MmApi exhibited activity on an apiose-containing oligosaccharide derived from the pectic polysaccharide rhamnogalacturonan-II. While the crystallographic model of MmApi was similar to the endo-apiosidase from Bacteroides thetaiotaomicron, differences in the shape of the binding sites indicated that MmApi could cleave apioses within oligosaccharides of different compositions.

CONCLUSION:

This enzyme represents a novel tool for researchers interested in studying the physiology and structure of plant cell walls and developing biocatalytic strategies for drug and flavor production.
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Polissacarídeos / Microbiota Idioma: En Revista: Biotechnol Lett Ano de publicação: 2024 Tipo de documento: Article País de afiliação: Brasil País de publicação: Holanda

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Polissacarídeos / Microbiota Idioma: En Revista: Biotechnol Lett Ano de publicação: 2024 Tipo de documento: Article País de afiliação: Brasil País de publicação: Holanda